RNAcentral: an international database of ncRNA sequences

作者： Petrov, Anton I. ¹ Kay, Simon J. E. ¹ Gibson, Richard ¹ Kulesha, Eugene ¹ Staines, Dan ¹ Bruford, Elspeth A. ¹ Wright, Mathew W. ¹ Burge, Sarah ¹ Finn, Robert D. ¹ Kersey, Paul J. ¹ Cochrane, Guy ¹ Bateman, Alex ¹ Griffiths-Jones, Sam ² Harrow, Jennifer ³ Chan, Patricia P. ⁴ Lowe, Todd M. ⁴ Zwieb, Christian W. ⁵ Wower, Jacek ⁶ Williams, Kelly P. ⁷ Hudson, Corey M. ⁷ Gutell, Robin ⁸ Clark, Michael B. ⁹ Dinger, Marcel ¹⁰ Quek, Xiu Cheng ¹⁰ Bujnicki, Janusz M. ¹¹ Bujnicki, Janusz M. ¹² Chua, Nam-Hai ¹³ Liu, Jun ¹³ Wang, Huan ¹³ Skogerbo, Geir ¹⁴ Zhao, Yi ¹⁴ Chen, Runsheng ¹⁴ Skogerbo, Geir ¹⁵ Zhao, Yi ¹⁵ Chen, Runsheng ¹⁵ Skogerbo, Geir ¹⁶ Zhao, Yi ¹⁶ Chen, Runsheng ¹⁶ Zhu, Weimin ¹⁷ Zhu, Weimin ¹⁸ Cole, James R. ¹⁹ Chai, Benli ¹⁹ Huang, Hsien-Da ²⁰ Huang, His-Yuan ²⁰ Cherry, J. Michael ²¹ Hatzigeorgiou, Artemis ²² Pruitt, Kim D. ²³
作者单位：

1. European Bioinformat Inst, European Mol Biol Lab, Cambridge CB10 1SD, England.

2. Univ Manchester, Fac Life Sci, Manchester M13 9PT, Lancs, England.

3. Wellcome Trust Sanger Inst, Cambridge CB10 1SD, England.

4. Univ Calif Santa Cruz, Dept Biomol Engn, Santa Cruz, CA 95064 USA.

5. Univ Texas Hlth Sci Ctr San Antonio, Dept Biochem, San Antonio, TX 78229 USA.

6. Auburn Univ, Dept Anim Sci, Auburn, AL 36849 USA.

7. Sandia Natl Labs, Livermore, CA 94551 USA.

8. Univ Texas Austin, Dept Integrat Biol, Austin, TX 78712 USA.

9. Univ Oxford, Dept Physiol Anat & Genet, MRC, Funct Genom Unit, Oxford OX1 3PT, England.

10. St Vincents Hosp, Garvan Inst Med Res, Kinghorn Ctr Clin Genom, Darlinghurst, NSW 2010, Australia.

11. Int Inst Mol & Cell Biol Warsaw, Lab Bioinformat & Prot Engn, PL-02109 Warsaw, Poland.

12. Adam Mickiewicz Univ, Inst Mol Biol & Biotechnol, Fac Biol, Lab Bioinformat, PL-61614 Poznan, Poland.

13. Rockefeller Univ, Plant Mol Biol Lab, New York, NY 10065 USA.

14. Chinese Acad Sci, Inst Biophys, Lab Noncoding RNA, Beijing 100101, Peoples R China.

15. Chinese Acad Sci, Inst Comp Technol, Beijing 100190, Peoples R China.

16. Chinese Acad Med Sci, Inst Basic Med Sci, Beijing, Peoples R China.

17. Peking Union Med Coll, Sch Basic Med, Beijing 100005, Peoples R China.

18. Taicang Inst Life Sci Informat, Suzhou 215400, Peoples R China.

19. Michigan State Univ, E Lansing, MI 48824 USA.

20. Natl Chiao Tung Univ, Dept Biol Sci & Technol, Inst Bioinformat & Syst Biol, Hsinchu, Taiwan.

21. Stanford Univ, Dept Genet, Palo Alto, CA 94304 USA.

22. Univ Thessaly, Dept Comp & Commun Engn, Volos 38221, Greece.

23. Natl Lib Med, Natl Ctr Biotechnol Informat, Bethesda, MD 20894 USA.
提交时间：2016-05-12 08:40:40

摘要: The field of non-coding RNA biology has been hampered by the lack of availability of a comprehensive, up-to-date collection of accessioned RNA sequences. Here we present the first release of RNAcentral, a database that collates and integrates information from an international consortium of established RNA sequence databases. The initial release contains over 8.1 million sequences, including representatives of all major functional classes. A web portal (http://rnacentral.org) provides free access to data, search functionality, cross-references, source code and an integrated genome browser for selected species.

RNA GENES EVOLUTION PROJECT ARCHIVE GENCODE UPDATE

期刊： NUCLEIC ACIDS RESEARCH
分类： 生物学 >> 生物物理学 >> 生物物理、生物化学与分子生物学
引用： ChinaXiv:201605.01468 (或此版本 ChinaXiv:201605.01468V1)
DOI:10.12074/201605.01468V1
CSTR:32003.36.ChinaXiv.201605.01468.V1
推荐引用方式： Petrov, Anton I.,Kay, Simon J. E.,Gibson, Richard,Kulesha, Eugene,Staines, Dan,Bruford, Elspeth A.,Wright, Mathew W.,Burge, Sarah,Finn, Robert D.,Kersey, Paul J.,Cochrane, Guy,Bateman, Alex,Griffiths-Jones, Sam,Harrow, Jennifer,Chan, Patricia P.,Lowe, Todd M.,Zwieb, Christian W.,Wower, Jacek,Williams, Kelly P.,Hudson, Corey M.,Gutell, Robin,Clark, Michael B.,Dinger, Marcel,Quek, Xiu Cheng,Bujnicki, Janusz M.,Bujnicki, Janusz M.,Chua, Nam-Hai,Liu, Jun,Wang, Huan,Skogerbo, Geir,Zhao, Yi,Chen, Runsheng,Skogerbo, Geir,Zhao, Yi,Chen, Runsheng,Skogerbo, Geir,Zhao, Yi,Chen, Runsheng,Zhu, Weimin,Zhu, Weimin,Cole, James R.,Chai, Benli,Huang, Hsien-Da,Huang, His-Yuan,Cherry, J. Michael,Hatzigeorgiou, Artemis,Pruitt, Kim D..(2016).RNAcentral: an international database of ncRNA sequences.NUCLEIC ACIDS RESEARCH.[ChinaXiv:201605.01468] (点此复制)

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